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Copyright in this book is held by Princeton University Press, who have kindly agreed to allow us to keep the book available on the web.  Copyright in this book is held by Princeton University Press, who have kindly agreed to allow us to keep the book available on the web.  
−  This textbook is intended for researchers interested in the application of feedback and control to biomolecular systems. The material has been designed so that it can be used in parallel with ''Feedback Systems'' as part of a course on biomolecular feedback and control systems, or as a standalone reference for readers who have had a basic course in feedback and  +  This textbook is intended for researchers interested in the application of feedback and control to biomolecular systems. The material has been designed so that it can be used in parallel with ''Feedback Systems'' as part of a course on biomolecular feedback and control systems, or as a standalone reference for readers who have had a basic course in feedback and control theory. 
−  control theory  +  
===== News ([[Archived newsarchive]]) =====  ===== News ([[Archived newsarchive]]) =====  
−  * 14 Sep 2014: PDFs posted  +  * 14 Sep 2014: PDFs posted for [[Version 1.1b]] 
* 10 Sep 2014: new web site set up  * 10 Sep 2014: new web site set up  
=== Contents ===  === Contents ===  
{ width=100% border=1  { width=100% border=1  
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−  * {{BFS pdfPreface and Contentsbfsfrontmatter14Sep14}}  +  * '''{{BFS pdfPreface and Contentsbfsfrontmatter14Sep14}}''' 
−  * Chapter 1: {{BFS pdfIntroductory Conceptsbfsintro14Sep14}}  +  * '''Chapter 1: {{BFS pdfIntroductory Conceptsbfsintro14Sep14}}''' 
** Systems Biology: Modeling, Analysis and the Role of Feedback  ** Systems Biology: Modeling, Analysis and the Role of Feedback  
** The Cell as a System  ** The Cell as a System  
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** Input/Output Modeling  ** Input/Output Modeling  
** From Systems to Synthetic Biology  ** From Systems to Synthetic Biology  
−  * Chapter 2: {{BFS pdfCore Processesbfscoreproc14Sep14}}  +  * '''Chapter 2: {{BFS pdfCore Processesbfscoreproc14Sep14}}''' 
** Modeling Techniques  ** Modeling Techniques  
** Transcription and Translation  ** Transcription and Translation  
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** PostTranscriptional Regulation  ** PostTranscriptional Regulation  
** Cellular Subsystems  ** Cellular Subsystems  
−  * Chapter 3: {{BFS pdfDynamic Behaviorbfsdynamics14Sep14}}  +  * '''Chapter 3: {{BFS pdfDynamic Behaviorbfsdynamics14Sep14}}''' 
** Analysis Near Equilibria  ** Analysis Near Equilibria  
** Robustness  ** Robustness  
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** Bifurcations  ** Bifurcations  
** Model Reduction Techniques  ** Model Reduction Techniques  
−  * Chapter 4: {{BFS pdfStochastic Modeling and Analysisbfsstochastic14Sep14}}  +  * '''Chapter 4: {{BFS pdfStochastic Modeling and Analysisbfsstochastic14Sep14}}''' 
** Stochastic Modeling of Biochemical Systems  ** Stochastic Modeling of Biochemical Systems  
** Simulation of Stochastic Systems  ** Simulation of Stochastic Systems  
** Input/Output Linear Stochastic Systems  ** Input/Output Linear Stochastic Systems  
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−  * Chapter 5: {{BFS pdfBiological Circuit Componentsbfscircuits14Sep14}}  +  * '''Chapter 5: {{BFS pdfBiological Circuit Componentsbfscircuits14Sep14}}''' 
** Introduction to Biological Circuit Design  ** Introduction to Biological Circuit Design  
** Negative Autoregulation  ** Negative Autoregulation  
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** An Incoherent Feedforward Loop (IFFL)  ** An Incoherent Feedforward Loop (IFFL)  
** Bacterial Chemotaxis  ** Bacterial Chemotaxis  
−  * Chapter 6: {{BFS pdfInterconnecting Componentsbfsmodules14Sep14}}  +  * '''Chapter 6: {{BFS pdfInterconnecting Componentsbfsmodules14Sep14}}''' 
** Input/Output Modeling and the Modularity Assumption  ** Input/Output Modeling and the Modularity Assumption  
** Introduction to Retroactivity  ** Introduction to Retroactivity  
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** Insulation Devices: Retroactivity Attentuation  ** Insulation Devices: Retroactivity Attentuation  
** A Case Study on the Use of Insulation Devices  ** A Case Study on the Use of Insulation Devices  
−  * Chapter 7: {{BFS pdfDesign Tradeoffsbfstradeoffs14Sep14}}  +  * '''Chapter 7: {{BFS pdfDesign Tradeoffsbfstradeoffs14Sep14}}''' 
** Competition for Shared Cellular Resources  ** Competition for Shared Cellular Resources  
** Stochastic Effects: Design Tradeoffs in Systems with Large Gains  ** Stochastic Effects: Design Tradeoffs in Systems with Large Gains  
−  *  +  * '''{{BFS pdfBibliography and Indexbfsbackmatter14Sep14}}''' 
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=== Resources ===  === Resources ===  
* [[ErrataList of errata]]  * [[ErrataList of errata]] 
Latest revision as of 04:57, 28 June 2015
Biomolecular Feedback Systems 
Domitilla Del Vecchio and Richard M. Murray 
Welcome to BFSwiki. This is the wiki for the text Biomolecular Feedback Systems by Domitilla Del Vecchio and Richard M. Murray. On this site you will find the complete text of the book as well as additional materials associated with the text.
Copyright in this book is held by Princeton University Press, who have kindly agreed to allow us to keep the book available on the web.
This textbook is intended for researchers interested in the application of feedback and control to biomolecular systems. The material has been designed so that it can be used in parallel with Feedback Systems as part of a course on biomolecular feedback and control systems, or as a standalone reference for readers who have had a basic course in feedback and control theory.
News (archive)
 14 Sep 2014: PDFs posted for Version 1.1b
 10 Sep 2014: new web site set up
Contents

