<?xml version="1.0" encoding="UTF-8"?>
<!-- Created by XMLPrettyPrinter on 10/16/2002 -->
<sbml xmlns = "http://www.sbml.org/sbml/level1" level = "1" version = "1" xmlns:jd = "http://www.sys-bio.org/sbml">
   <!--                     -->
   <!--  Model Starts Here  -->
   <!--                     -->
   <model name = "untitled">
      <listOfCompartments>
         <compartment name = "uVol" volume = "1">
            <annotations>
               <jd:display>
                  <boundingBox x = "0" y = "0" w = "0" h = "0"/>
               </jd:display>
            </annotations>
         </compartment>
      </listOfCompartments>
      <listOfSpecies>
         <specie name = "RNAP" boundaryCondition = "false" initialAmount = "0.66" compartment = "uVol">
            <annotations>
               <jd:display x = "234" y = "41" iconIndex = "0" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
         <specie name = "RNAnuc" boundaryCondition = "false" initialAmount = "96" compartment = "uVol">
            <annotations>
               <jd:display x = "258" y = "134" iconIndex = "1" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
         <specie name = "mRNAnuc" boundaryCondition = "false" initialAmount = "0.003" compartment = "uVol">
            <annotations>
               <jd:display x = "435" y = "136" iconIndex = "2" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
         <specie name = "mRNAcyt" boundaryCondition = "false" initialAmount = "3.8" compartment = "uVol">
            <annotations>
               <jd:display x = "357" y = "243" iconIndex = "2" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
         <specie name = "RNAcyt" boundaryCondition = "false" initialAmount = "0.005" compartment = "uVol">
            <annotations>
               <jd:display x = "205" y = "244" iconIndex = "1" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
         <specie name = "AA" boundaryCondition = "false" initialAmount = "90.465" compartment = "uVol">
            <annotations>
               <jd:display x = "487" y = "338" iconIndex = "3" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
         <specie name = "P" boundaryCondition = "false" initialAmount = "20" compartment = "uVol">
            <annotations>
               <jd:display x = "274" y = "338" iconIndex = "4" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
         <specie name = "Src" boundaryCondition = "true" initialAmount = "0" compartment = "uVol">
            <annotations>
               <jd:display x = "46" y = "42" iconIndex = "-1" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
         <specie name = "Waste" boundaryCondition = "true" initialAmount = "0" compartment = "uVol">
            <annotations>
               <jd:display x = "403" y = "41" iconIndex = "-1" edgeThickness = "1" edgeColor = "0" selectedEdgeColor = "255" fillColor = "16777215" borderType = "ntRound">
                  <font fontName = "Arial" fontSize = "10" fontStyle = "" fontColor = "0"/>
               </jd:display>
            </annotations>
         </specie>
      </listOfSpecies>
      <listOfReactions>
         <reaction name = "J0" reversible = "false">
            <listOfReactants>
               <specieReference specie = "Src" stoichiometry = "1"/>
            </listOfReactants>
            <listOfProducts>
               <specieReference specie = "RNAP" stoichiometry = "1"/>
            </listOfProducts>
            <annotations>
               <jd:arcSeg LineThickness = "1" LineColor = "0" FillColor = "16777215" SelectedLineColor = "255">
                  <pt x = "0" y = "0"/>
                  <pt x = "154" y = "50"/>
                  <pt x = "154" y = "50"/>
               </jd:arcSeg>
            </annotations>
            <kineticLaw formula = "Vi/(1 + P/Ki)">
               <listOfParameters>
                  <parameter name = "Vi" value = "10"/>
                  <parameter name = "Ki" value = "0.6"/>
               </listOfParameters>
            </kineticLaw>
         </reaction>
         <reaction name = "J1" reversible = "false">
            <listOfReactants>
               <specieReference specie = "RNAP" stoichiometry = "1"/>
            </listOfReactants>
            <listOfProducts>
               <specieReference specie = "Waste" stoichiometry = "1"/>
            </listOfProducts>
            <annotations>
               <jd:arcSeg LineThickness = "1" LineColor = "0" FillColor = "16777215" SelectedLineColor = "255">
                  <pt x = "0" y = "0"/>
                  <pt x = "331" y = "49"/>
                  <pt x = "338" y = "48"/>
               </jd:arcSeg>
            </annotations>
            <kineticLaw formula = "Vkd*RNAP">
               <listOfParameters>
                  <parameter name = "Vkd" value = "1"/>
               </listOfParameters>
            </kineticLaw>
         </reaction>
         <reaction name = "J2" reversible = "false">
            <listOfReactants>
               <specieReference specie = "RNAnuc" stoichiometry = "1"/>
            </listOfReactants>
            <listOfProducts>
               <specieReference specie = "mRNAnuc" stoichiometry = "1"/>
            </listOfProducts>
            <annotations>
               <jd:arcSeg LineThickness = "1" LineColor = "0" FillColor = "16777215" SelectedLineColor = "255">
                  <pt x = "0" y = "0"/>
                  <pt x = "373" y = "143"/>
                  <pt x = "373" y = "143"/>
               </jd:arcSeg>
            </annotations>
            <kineticLaw formula = "Vm1*RNAnuc*RNAP/(Km1 + RNAnuc)">
               <listOfParameters>
                  <parameter name = "Vm1" value = "50"/>
                  <parameter name = "Km1" value = "1"/>
               </listOfParameters>
            </kineticLaw>
         </reaction>
         <reaction name = "J3" reversible = "false">
            <listOfReactants>
               <specieReference specie = "mRNAnuc" stoichiometry = "1"/>
            </listOfReactants>
            <listOfProducts>
               <specieReference specie = "mRNAcyt" stoichiometry = "1"/>
            </listOfProducts>
            <annotations>
               <jd:arcSeg LineThickness = "1" LineColor = "0" FillColor = "16777215" SelectedLineColor = "255">
                  <pt x = "0" y = "0"/>
                  <pt x = "459" y = "213"/>
                  <pt x = "466" y = "241"/>
               </jd:arcSeg>
            </annotations>
            <kineticLaw formula = "k1*mRNAnuc">
               <listOfParameters>
                  <parameter name = "k1" value = "100"/>
               </listOfParameters>
            </kineticLaw>
         </reaction>
         <reaction name = "J4" reversible = "false">
            <listOfReactants>
               <specieReference specie = "mRNAcyt" stoichiometry = "1"/>
            </listOfReactants>
            <listOfProducts>
               <specieReference specie = "RNAcyt" stoichiometry = "1"/>
            </listOfProducts>
            <annotations>
               <jd:arcSeg LineThickness = "1" LineColor = "0" FillColor = "16777215" SelectedLineColor = "255">
                  <pt x = "0" y = "0"/>
                  <pt x = "305" y = "251"/>
                  <pt x = "305" y = "252"/>
               </jd:arcSeg>
            </annotations>
            <kineticLaw formula = "Vm2*mRNAcyt/(mRNAcyt + Km2)">
               <listOfParameters>
                  <parameter name = "Vm2" value = "50"/>
                  <parameter name = "Km2" value = "0.5"/>
               </listOfParameters>
            </kineticLaw>
         </reaction>
         <reaction name = "J5" reversible = "false">
            <listOfReactants>
               <specieReference specie = "RNAcyt" stoichiometry = "1"/>
            </listOfReactants>
            <listOfProducts>
               <specieReference specie = "RNAnuc" stoichiometry = "1"/>
            </listOfProducts>
            <annotations>
               <jd:arcSeg LineThickness = "1" LineColor = "0" FillColor = "16777215" SelectedLineColor = "255">
                  <pt x = "0" y = "0"/>
                  <pt x = "227" y = "214"/>
                  <pt x = "210" y = "150"/>
               </jd:arcSeg>
            </annotations>
            <kineticLaw formula = "k2*RNAcyt">
               <listOfParameters>
                  <parameter name = "k2" value = "100"/>
               </listOfParameters>
            </kineticLaw>
         </reaction>
         <reaction name = "J6" reversible = "false">
            <listOfReactants>
               <specieReference specie = "AA" stoichiometry = "1"/>
            </listOfReactants>
            <listOfProducts>
               <specieReference specie = "P" stoichiometry = "1"/>
            </listOfProducts>
            <annotations>
               <jd:arcSeg LineThickness = "1" LineColor = "0" FillColor = "16777215" SelectedLineColor = "255">
                  <pt x = "0" y = "0"/>
                  <pt x = "393" y = "378"/>
                  <pt x = "385" y = "376"/>
               </jd:arcSeg>
            </annotations>
            <kineticLaw formula = "Vm3*mRNAcyt*AA/(AA + Km3)">
               <listOfParameters>
                  <parameter name = "Vm3" value = "50"/>
                  <parameter name = "Km3" value = "80"/>
               </listOfParameters>
            </kineticLaw>
         </reaction>
         <reaction name = "J7" reversible = "false">
            <listOfReactants>
               <specieReference specie = "P" stoichiometry = "1"/>
            </listOfReactants>
            <listOfProducts>
               <specieReference specie = "AA" stoichiometry = "1"/>
            </listOfProducts>
            <annotations>
               <jd:arcSeg LineThickness = "1" LineColor = "0" FillColor = "16777215" SelectedLineColor = "255">
                  <pt x = "0" y = "0"/>
                  <pt x = "377" y = "301"/>
                  <pt x = "385" y = "301"/>
               </jd:arcSeg>
            </annotations>
            <kineticLaw formula = "Vm4*P/(P + Km4)">
               <listOfParameters>
                  <parameter name = "Vm4" value = "50"/>
                  <parameter name = "Km4" value = "1"/>
               </listOfParameters>
            </kineticLaw>
         </reaction>
      </listOfReactions>
   </model>
</sbml>
